LCE_Selection_base Member List

This is the complete list of members for LCE_Selection_base, including all inherited members.

_base_fitness	LCE_Selection_base	protected
_diffs	LCE_Selection_base	private
_do_change_local_opt	LCE_Selection_base	private
_eVariance	LCE_Selection_base	protected
_event_name	LifeCycleEvent	protected
_fitness	LCE_Selection_base	protected
_FitnessFixModel	LCE_Selection_base	private
_Fpedigree	LCE_Selection_base	private
_getFitness	LCE_Selection_base	protected
_getRawFitness	LCE_Selection_base	protected
_gsl_selection_matrix	LCE_Selection_base	private
_ind_cntr	LCE_Selection_base	protected
_is_absolute	LCE_Selection_base	protected
_is_local	LCE_Selection_base	protected
_LCELinkedTraitIndex	LifeCycleEvent	protected
_LCELinkedTraitType	LifeCycleEvent	protected
_letheq	LCE_Selection_base	private
_linear_selection_offset	LCE_Selection_base	private
_linear_selection_strength	LCE_Selection_base	private
_local_optima	LCE_Selection_base	private
_max_fitness	LCE_Selection_base	protected
_mean_fitness	LCE_Selection_base	protected
_mean_trait_value	LCE_Selection_base	private
_paramSet	SimComponent	protected
_popPtr	LifeCycleEvent	protected
_rate_of_change_is_std	LCE_Selection_base	private
_rate_of_change_local_optima	LCE_Selection_base	private
_res1	LCE_Selection_base	private
_scaling_factor	LCE_Selection_base	protected
_selection_matrix	LCE_Selection_base	private
_selection_variance	LCE_Selection_base	protected
_SelectionModels	LCE_Selection_base	protected
_selectTraitDimension	LCE_Selection_base	protected
_set_std_rate_at_generation	LCE_Selection_base	private
_setNewLocalOptima	LCE_Selection_base	protected
_setScalingFactor	LCE_Selection_base	protected
_stater	LCE_Selection_base	protected
_std_rate_reference_patch	LCE_Selection_base	private
_survival	LCE_Selection_base	protected
_TraitIndices	LCE_Selection_base	protected
_Traits	LCE_Selection_base	protected
_writer	LCE_Selection_base	protected
add_parameter(Param *param)	SimComponent	inlinevirtual
add_parameter(std::string Name, param_t Type, bool isRequired, bool isBounded, double low_bnd, double up_bnd)	SimComponent	inlinevirtual
add_parameter(std::string Name, param_t Type, bool isRequired, bool isBounded, double low_bnd, double up_bnd, ParamUpdaterBase *updater)	SimComponent	inlinevirtual
addAgeClass()	LCE_Selection_base	inlinevirtual
addPhenotypicSD(unsigned int deme, double *stDev)	LCE_Selection_base
attach_trait(string trait)	LifeCycleEvent	inlinevirtual
changeLocalOptima()	LCE_Selection_base
checkChangeLocalOptima()	LCE_Selection_base
clone()	LCE_Selection_base	inlinevirtual
doViabilitySelection(sex_t SEX, age_idx AGE, Patch *patch, unsigned int p)	LCE_Selection_base
execute()	LCE_Selection_base	virtual
get_event_name()	LifeCycleEvent	inlinevirtual
get_name()	SimComponent	inlinevirtual
get_parameter(std::string name)	SimComponent	inlinevirtual
get_parameter_value(std::string name)	SimComponent	inlinevirtual
get_paramset()	SimComponent	inlinevirtual
get_pop_ptr()	LifeCycleEvent	inlinevirtual
get_rank()	LifeCycleEvent	inlinevirtual
getFitness(Individual *ind, unsigned int patch)	LCE_Selection_base	inline
getFitnessAbsolute(Individual *ind, unsigned int patch)	LCE_Selection_base
getFitnessDirect(Individual *offsprg, unsigned int patch, unsigned int trait)	LCE_Selection_base	inline
getFitnessFixedEffect(Individual *offsprg, unsigned int patch, unsigned int trait)	LCE_Selection_base	inline
getFitnessMultivariateGaussian(Individual *offsprg, unsigned int patch, unsigned int trait)	LCE_Selection_base
getFitnessMultivariateGaussian_VE(Individual *offsprg, unsigned int patch, unsigned int trait)	LCE_Selection_base
getFitnessRelative(Individual *ind, unsigned int patch)	LCE_Selection_base	inline
getFitnessUnivariateGaussian(Individual *offsprg, unsigned int patch, unsigned int trait)	LCE_Selection_base
getFitnessUnivariateGaussian_VE(Individual *offsprg, unsigned int patch, unsigned int trait)	LCE_Selection_base
getFitnessUnivariateLinear(Individual *offsprg, unsigned int patch, unsigned int trait)	LCE_Selection_base
getFitnessUnivariateQuadratic(Individual *ind, unsigned int patch, unsigned int trait)	LCE_Selection_base
getLocalOptima() const	LCE_Selection_base	inline
getMaxFitness(age_idx age)	LCE_Selection_base
getMaxPatchFitness(age_idx age, unsigned int p)	LCE_Selection_base
getMeanFitness(age_idx age)	LCE_Selection_base
getMeanPatchFitness(age_idx age, unsigned int p)	LCE_Selection_base
has_parameter(std::string name)	SimComponent	inlinevirtual
init(Metapop *popPtr)	LifeCycleEvent	inlinevirtual
LCE_Breed_Selection class	LCE_Selection_base	friend
LCE_Selection_base()	LCE_Selection_base
LCE_SelectionFH class	LCE_Selection_base	friend
LCE_SelectionSH class	LCE_Selection_base	friend
LifeCycleEvent(const char *name, const char *trait_link)	LifeCycleEvent	inline
loadFileServices(FileServices *loader)	LCE_Selection_base	virtual
loadStatServices(StatServices *loader)	LCE_Selection_base	virtual
loadUpdaters(UpdaterServices *loader)	SimComponent	inlinevirtual
removeAgeClass()	LCE_Selection_base	inlinevirtual
requiredAgeClass()	LCE_Selection_base	inlinevirtual
resetCounters()	LCE_Selection_base
resetParameterFromSource(std::string param, SimComponent *cmpt)	LCE_Selection_base	inlinevirtual
set_event_name(std::string &name)	LifeCycleEvent	inlinevirtual
set_event_name(const char *name)	LifeCycleEvent	inlinevirtual
set_fit_model()	LCE_Selection_base
set_local_optima()	LCE_Selection_base
set_param_rate_of_change()	LCE_Selection_base
set_paramset(std::string name, bool required, SimComponent *owner)	LifeCycleEvent	inlinevirtual
SimComponent::set_paramset(ParamSet *paramset)	SimComponent	inlinevirtual
set_paramsetFromCopy(const ParamSet &PSet)	SimComponent	inlinevirtual
set_pop_ptr(Metapop *popPtr)	LifeCycleEvent	inlinevirtual
set_sel_model()	LCE_Selection_base
set_std_rate_of_change()	LCE_Selection_base
setLocalOptima()	LCE_Selection_base
setMeanFitness(age_idx age)	LCE_Selection_base	inline
setMeans(unsigned int tot_ind)	LCE_Selection_base
setParameters()	LCE_Selection_base	virtual
setScalingFactorAbsolute(age_idx age, unsigned int p)	LCE_Selection_base	inline
setScalingFactorForLinearSelection(age_idx age, unsigned int p)	LCE_Selection_base
setScalingFactorGlobal(age_idx age, unsigned int p)	LCE_Selection_base
setScalingFactorLocal(age_idx age, unsigned int p)	LCE_Selection_base
setScalingFactorMaxGlobal(age_idx age, unsigned int p)	LCE_Selection_base
setScalingFactorMaxLocal(age_idx age, unsigned int p)	LCE_Selection_base
setSelectionMatrix()	LCE_Selection_base
SimComponent()	SimComponent	inline
updateFitnessCounters(double fitness, unsigned int ped_class, bool survived)	LCE_Selection_base
~LCE_Selection_base()	LCE_Selection_base	virtual
~LifeCycleEvent()	LifeCycleEvent	inlinevirtual
~SimComponent()	SimComponent	inlinevirtual