utils.h

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#ifndef UTILS_H
#define UTILS_H
 
#include "types.h"
#include "tmatrix.h"
#include <string>
 
 
 
 
 
extern bool setSpatialMatrix (string param, string numColCondition, TMatrix *inMat,
                              TMatrix *outMat, unsigned int nVal, unsigned int patchNbr,
                              bool doRandomize = false);
 
extern double my_mean (double *data, unsigned int size);
 
extern double my_mean_no_nan (double *data, unsigned int size);
 
extern double my_variance_with_fixed_mean (double *data, unsigned int size, double mean);
 
extern double my_variance_with_fixed_mean_no_nan (double *data, unsigned int size, double mean);
 
extern double my_covariance_no_nan (double *data1, double *data2,
                                                    unsigned int size1, unsigned int size2);
 
extern unsigned long nChooseK(int n, int k);
 
extern TMatrix nChooseKVec(int n, int k);
 
#endif