Nemo  2.3.56
Simulate forward-in-time genetic evolution in a spatially explicit, individual-based stochastic simulator
TTNeutralGenesFH Member List

This is the complete list of members for TTNeutralGenesFH, including all inherited members.

_current_filenameFileHandlerprivate
_current_generationFileHandlerprivate
_current_replicateFileHandlerprivate
_ExecRankFileHandlerprivate
_extensionFileHandlerprivate
_FHLinkedTraitTraitFileHandler< TProtoNeutralGenes >protected
_FHLinkedTraitIndexTraitFileHandler< TProtoNeutralGenes >protected
_GenerationOccurrenceFileHandlerprivate
_generationsFileHandlerprivate
_genITERFileHandlerprivate
_isGenerationPeriodicFileHandlerprivate
_isInputHandlerFileHandlerprivate
_isMasterExecFileHandlerprivate
_isReplicatePeriodicFileHandlerprivate
_multipleOccurencesFileHandlerprivate
_output_optionTTNeutralGenesFHprivate
_pathFileHandlerprivate
_popFileHandlerprotected
_ReplicateOccurrenceFileHandlerprivate
_serviceFileHandlerprivate
FHread(string &filename)TTNeutralGenesFHvirtual
TraitFileHandler< TProtoNeutralGenes >::FHread(string &filename)=0TraitFileHandler< TProtoNeutralGenes >pure virtual
FHwrite()TTNeutralGenesFHvirtual
FileHandler(const char *ext)FileHandlerinline
get_ExecRank()FileHandlerinline
get_extension()FileHandlerinline
get_filename()FileHandler
get_GenerationOccurrence()FileHandlerinline
get_isGenerationPeriodic()FileHandlerinline
get_isInputHandler()FileHandlerinline
get_isMasterExec()FileHandlerinline
get_isReplicatePeriodic()FileHandlerinline
get_OccMatrix()FileHandlerinline
get_path()FileHandlerinline
get_pop_ptr()FileHandlerinline
get_ReplicateOccurrence()FileHandlerinline
get_service()FileHandlerinline
ifExist()FileHandlervirtual
init()FileHandlervirtual
print_PLINK_PED(ofstream &FH, age_idx Ax, Patch *patch)TTNeutralGenesFH
set(bool rpl_per, bool gen_per, int rpl_occ, int gen_occ, int rank, string path, TProtoNeutralGenes *trait_proto)TraitFileHandler< TProtoNeutralGenes >virtual
FileHandler::set(bool rpl_per, bool gen_per, int rpl_occ, int gen_occ, int rank, string path)FileHandlerinlinevirtual
set_ExecRank(int val)FileHandlerinline
set_extension(const char *ext)FileHandlerinline
set_GenerationOccurrence(unsigned int val)FileHandlerinline
set_isGenerationPeriodic(bool val)FileHandlerinline
set_isInputHandler(bool val)FileHandlerinline
set_isMasterExec(bool is)FileHandlerinline
set_isReplicatePeriodic(bool val)FileHandlerinline
set_multi(bool rpl_per, bool gen_per, int rpl_occ, TMatrix *Occ, string path)FileHandlerinlinevirtual
set_OccMatrix(TMatrix *occ)FileHandlerinline
set_path()FileHandler
set_pop_ptr(Metapop *pop_ptr)FileHandlerinline
set_ReplicateOccurrence(unsigned int val)FileHandlerinline
set_service(FileServices *srv)FileHandlerinline
set_write_fct(void(TTNeutralGenesFH::*fct_ptr)())TTNeutralGenesFHinline
setOutputOption(string opt)TTNeutralGenesFH
TraitFileHandler(TProtoNeutralGenes *trait_proto, const char *ext)TraitFileHandler< TProtoNeutralGenes >
TTNeutralGenesFH(TProtoNeutralGenes *TP)TTNeutralGenesFHinline
update()FileHandlervirtual
write_fctTTNeutralGenesFHprivate
write_Fst_i()TTNeutralGenesFH
write_FSTAT()TTNeutralGenesFH
write_GENEPOP()TTNeutralGenesFH
write_patch_FSTAT(Patch *patch, sex_t SEX, age_idx AGE, ofstream &FH, unsigned int digits)TTNeutralGenesFH
write_patch_GENEPOP(Patch *patch, sex_t SEX, age_idx AGE, ofstream &FH, unsigned int digits)TTNeutralGenesFH
write_patch_TAB(Patch *patch, sex_t SEX, age_idx AGE, ofstream &FH)TTNeutralGenesFH
write_PLINK()TTNeutralGenesFH
write_PLINK_BED(ofstream &BED)TTNeutralGenesFH
write_TAB()TTNeutralGenesFH
write_varcompWC()TTNeutralGenesFH
~FileHandler()FileHandlerinlinevirtual
~Handler()Handlerinlinevirtual
~TraitFileHandler()TraitFileHandler< TProtoNeutralGenes >inlinevirtual
~TTNeutralGenesFH()TTNeutralGenesFHinlinevirtual

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