Nemo
2.3.56
Simulate forward-in-time genetic evolution in a spatially explicit, individual-based stochastic simulator
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Regulates the patches to their carrying capacity, acts on each age class separately. More...
#include <LCEmisc.h>
Public Member Functions | |
LCE_Regulation () | |
virtual | ~LCE_Regulation () |
void | regulatePatch (Patch *patch, age_idx age, sex_t sex) |
virtual bool | setParameters () |
virtual void | execute () |
virtual LCE_Regulation * | clone () |
virtual void | loadFileServices (FileServices *loader) |
virtual void | loadStatServices (StatServices *loader) |
virtual bool | resetParameterFromSource (std::string param, SimComponent *cmpt) |
virtual age_t | removeAgeClass () |
virtual age_t | addAgeClass () |
virtual age_t | requiredAgeClass () |
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LifeCycleEvent (const char *name, const char *trait_link) | |
Cstor. More... | |
virtual | ~LifeCycleEvent () |
virtual void | init (Metapop *popPtr) |
Sets the pointer to the current Metapop and the trait link if applicable. More... | |
virtual bool | attach_trait (string trait) |
virtual void | set_paramset (std::string name, bool required, SimComponent *owner) |
virtual void | set_event_name (std::string &name) |
Set the name of the event (name of the ParamSet) and add the corresponding parameter to the set. More... | |
virtual void | set_event_name (const char *name) |
virtual string & | get_event_name () |
Accessor to the LCE's name. More... | |
virtual int | get_rank () |
Accessor to the LCE rank in the life cycle. More... | |
virtual void | set_pop_ptr (Metapop *popPtr) |
Accessors for the population pointer. More... | |
virtual Metapop * | get_pop_ptr () |
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SimComponent () | |
virtual | ~SimComponent () |
virtual void | loadUpdaters (UpdaterServices *loader) |
Loads the parameters and component updater onto the updater manager. More... | |
virtual void | set_paramset (ParamSet *paramset) |
Sets the ParamSet member. More... | |
virtual void | set_paramsetFromCopy (const ParamSet &PSet) |
Reset the set of parameters from a another set. More... | |
virtual ParamSet * | get_paramset () |
ParamSet accessor. More... | |
virtual void | add_parameter (Param *param) |
Interface to add a parameter to the set. More... | |
virtual void | add_parameter (std::string Name, param_t Type, bool isRequired, bool isBounded, double low_bnd, double up_bnd) |
Interface to add a parameter to the set. More... | |
virtual void | add_parameter (std::string Name, param_t Type, bool isRequired, bool isBounded, double low_bnd, double up_bnd, ParamUpdaterBase *updater) |
Interface to add a parameter and its updater to the set. More... | |
virtual Param * | get_parameter (std::string name) |
Param getter. More... | |
virtual double | get_parameter_value (std::string name) |
Param value getter. More... | |
virtual string | get_name () |
Returnd the name of the ParamSet, i.e. More... | |
virtual bool | has_parameter (std::string name) |
Param getter. More... | |
Additional Inherited Members | |
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std::string | _event_name |
The param name to be read in the init file. More... | |
Metapop * | _popPtr |
The ptr to the current Metapop. More... | |
std::string | _LCELinkedTraitType |
The name of the linked trait. More... | |
int | _LCELinkedTraitIndex |
The index in the individual's trait table of the linked trait. More... | |
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ParamSet * | _paramSet |
The parameters container. More... | |
Regulates the patches to their carrying capacity, acts on each age class separately.
Randomly removes individuals in each patch until each age class has reached the (sex-specific) carrying capacities of the patch.
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inline |
Referenced by clone().
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inlinevirtual |
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inlinevirtual |
Implements LifeCycleEvent.
References NONE.
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inlinevirtual |
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virtual |
Implements LifeCycleEvent.
References LifeCycleEvent::_popPtr, ADLTx, ADULTS, FEM, Metapop::getPatch(), Metapop::getPatchNbr(), MAL, message(), OFFSPRG, OFFSx, regulatePatch(), and Metapop::size().
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inlinevirtual |
Implements SimComponent.
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inlinevirtual |
Implements SimComponent.
References LifeCycleEvent::_popPtr, Patch::get_K(), IndFactory::recycle(), Patch::remove(), Patch::size(), and RAND::Uniform().
Referenced by execute().
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inlinevirtual |
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inlinevirtual |
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inlinevirtual |
Implements SimComponent.
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inlinevirtual |
Implements SimComponent.