- r -

• RAND() : RAND
• rand_exp() : LCE_Patch_Extinction
• rand_gaussian() : LCE_Patch_Extinction
• rand_lognormal() : LCE_Patch_Extinction
• rand_poisson() : LCE_Patch_Extinction
• rand_uniform() : LCE_Patch_Extinction
• RandBool() : RAND
• random_hermaphrodite() : LCE_Breed_base
• RandomMating() : LCE_Breed_base
• RandULong() : RAND
• rbernoul() : ParamsParser
• read() : BinaryFileParser, BinaryStorageBuffer, FileParser, ParamsParser, StreamParser
• read_trait() : Metapop
• readArguments() : StreamParser
• readUntilCharacter() : StreamParser
• recombine() : GeneticMap, Individual, TTProtoWithMap
• record() : TTWolbachiaFH
• recordRandomMap() : TTProtoWithMap
• recordStats() : StatServices
• recycle() : IndFactory
• reference() : bitstring::reference
• register_component() : SimRunner
• register_component_handlers() : SimRunner
• registerGeneticMap() : TTProtoWithMap
• registerIndForRecombine() : GeneticMap
• regulate() : LCE_Resize
• regulateAgeClassNoBackup() : LCE_Resize
• regulateAgeClassWithBackup() : LCE_Resize
• regulatePatch() : LCE_Regulation
• remove() : Patch
• removeAgeClass() : BinaryDataSaver, LCE_Aging, LCE_Breed, LCE_Breed_Disperse, LCE_Breed_Quanti, LCE_Breed_Selection, LCE_Breed_Selection_Disperse, LCE_Breed_Wolbachia, LCE_Cross, LCE_Disperse_base, LCE_FileServicesNotifier, LCE_Init_BDMI, LCE_NtrlInit, LCE_ParamUpdaterNotifier, LCE_Patch_Extinction, LCE_QuantiInit, LCE_QuantiModifier, LCE_Regulation, LCE_Resize, LCE_Selection_base, LCE_StatServiceNotifier, LifeCycleEvent
• removeChar() : tstring
• removeComment() : StreamParser
• removeDesignatedPatch() : LCE_Resize
• removeEnclosingChar() : tstring
• removeFirstCharOf() : tstring
• removeLastCharOf() : tstring
• removePatch() : Metapop
• removeSpaceAndComment() : StreamParser
• removeTrait() : Individual
• rep() : ParamsParser
• replaceCR() : StreamParser
• replaceMacro() : ParamsParser
• Replicate_LOOP() : SimRunner
• requiredAgeClass() : BinaryDataSaver, LCE_Aging, LCE_Breed, LCE_Breed_Disperse, LCE_Breed_Quanti, LCE_Breed_Selection, LCE_Breed_Selection_Disperse, LCE_Breed_Wolbachia, LCE_Cross, LCE_Disperse_base, LCE_FileServicesNotifier, LCE_Init_BDMI, LCE_NtrlInit, LCE_ParamUpdaterNotifier, LCE_Patch_Extinction, LCE_QuantiInit, LCE_QuantiModifier, LCE_Regulation, LCE_Resize, LCE_Selection_base, LCE_StatServiceNotifier, LifeCycleEvent
• rescaleMap() : GeneticMap
• reset() : bitstring, FileServices, Individual, Metapop, Param, ParamSet, ParamUpdaterBase, Service, SimRunner, StatHandlerBase, StatServices, TMatrix, TProtoDeletMutations_bitstring, TProtoDispersal, TProtoNeutralGenes, TProtoQuanti, TProtoWolbachia, TraitPrototype, TT_BDMI, TTDeletMutations_bitstring, TTDispersal, TTNeutralGenes, TTProtoWithMap, TTQuanti, TTrait, TTWolbachia, UpdaterServices
• reset_containers() : Patch
• reset_counters() : Individual, LCE_Disperse_base, Patch
• reset_effect_table() : TProtoDeletMutations_bitstring
• reset_inputParams() : ParamsParser
• reset_mutation_pointers() : TProtoQuanti
• reset_recombination_pointers() : TTProtoWithMap
• reset_services() : SimRunner
• reset_stat_table() : StatServices
• reset_tables() : GeneticMap
• resetCounters() : LCE_Selection_base
• resetCurrentOccurrence() : StatServices
• resetParameterFromSource() : BinaryDataSaver, LCE_Aging, LCE_Breed, LCE_Breed_Disperse, LCE_Breed_Quanti, LCE_Breed_Selection, LCE_Breed_Selection_Disperse, LCE_Breed_Wolbachia, LCE_Cross, LCE_Disperse_base, LCE_FileServicesNotifier, LCE_Init_BDMI, LCE_NtrlInit, LCE_ParamUpdaterNotifier, LCE_Patch_Extinction, LCE_QuantiInit, LCE_QuantiModifier, LCE_Regulation, LCE_Resize, LCE_Selection_base, LCE_StatServiceNotifier, Metapop, SimComponent, TProtoBDMI, TProtoDeletMutations_bitstring, TProtoDispersal, TProtoNeutralGenes, TProtoQuanti, TProtoWolbachia
• resetPtrs() : TTQuantiSH
• resetTable() : TTQFreqExtractor
• resizePatchArray() : Metapop
• retrieve_data() : Individual, Metapop, StorableComponent, TProtoBDMI, TProtoDeletMutations_bitstring, TProtoDispersal, TProtoNeutralGenes, TProtoQuanti, TProtoWolbachia, TT_BDMI, TTDeletMutations_bitstring, TTDispersal, TTNeutralGenes, TTQuanti, TTWolbachia
• rexp() : ParamsParser
• rgamma() : ParamsParser
• rlognorm() : ParamsParser
• rnorm() : ParamsParser
• rowSum() : TMatrix
• rpoiss() : ParamsParser
• run() : SimRunner
• run_event() : SimRunner
• runif() : ParamsParser
• runPostExec() : SimRunner
• runPostExecReplicateWise() : SimRunner