Nemo
2.3.56
Simulate forward-in-time genetic evolution in a spatially explicit, individual-based stochastic simulator
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- _ -
_2L :
TTNeutralGenes
_age :
Individual
,
Patch
,
StatRecBase
_age_flag :
LCE_QuantiModifier
_all_chooser :
TProtoQuanti
_allele_model :
TProtoQuanti
_allele_num :
TProtoNeutralGenes
,
TTNeutralGenes
_allele_value :
TProtoQuanti
_alleleCountTable :
TTNeutralGenesSH
_alleleFreqTable :
TTNeutralGenesSH
_allParams :
ParamManager
_alpha_male :
LCE_Breed_base
_arg :
LCE_StatServiceNotifier
,
Param
_arg1 :
StatRecBase
_arg2 :
StatRecBase
_atGeneration :
LCE_Cross
,
LCE_Resize
_back_mutation_rate :
TProtoDeletMutations_bitstring
_base_fitness :
LCE_Selection_base
_basename :
FileServices
_bit_count :
bitstring
_bitpos :
bitstring::reference
_bounds :
Param
_breed_disperse :
LCE_Breed_Disperse
_breed_func_ptr :
LCE_Breed_Wolbachia
_breed_selection :
LCE_Breed_Selection
_breed_selection_disperse :
LCE_Breed_Selection_Disperse
_buff :
BinaryDataLoader
,
BinaryDataSaver
,
BinaryStorageBuffer
_by_proportion :
LCE_Patch_Extinction
_by_size :
LCE_Patch_Extinction
_bytes_in :
BinaryStorageBuffer
_bytes_out :
BinaryStorageBuffer
_capacities :
Patch
_chrsmFirstLocusPosition :
GeneticMap
_chrsmFirstRecombPosition :
GeneticMap
_chrsmLength :
TTProtoWithMap
_classes :
DataTable< T >
_coa_matrix :
TTNeutralGenesSH
_cols :
TMatrix
_comp_cmd :
BinaryDataSaver
_comp_ext :
BinaryDataSaver
_components :
ComponentManager
_componentUpdater :
UpdaterServices
_containers :
Patch
_continuous_effects :
TProtoDeletMutations_bitstring
_covar :
TTQuantiSH
_cumulClassSizes :
DataTable< T >
_cumulGroupSizes :
DataTable< T >
_current_filename :
FileHandler
_current_generation :
FileHandler
_current_occurrence :
BinaryDataSaver
,
StatServices
_current_replicate :
FileHandler
_current_sim :
BinaryDataLoader
_currentAge :
Metapop
_currentGeneration :
Metapop
,
SimRunner
_currentIndividual :
GeneticMap
_currentParams :
SimBuilder
_currentRankInLifeCycle :
SimRunner
_currentReplicate :
Metapop
,
SimRunner
_currentStatValues :
StatServices
_currentTraits :
SimBuilder
_D :
TTNeutralGenesSH
_data :
bitstring
_deletAllCount :
TTDeletMutBitstrSH
_deletFreqTable :
TTDeletMutBitstrSH
_deletHmzLoci :
TTDeletMutBitstrSH
_deletHtzLoci :
TTDeletMutBitstrSH
_diffs :
LCE_Selection_base
_diploGenotCoding :
TT_BDMI
_diploGenotTableCoding :
TProtoBDMI
_dir :
BinaryDataSaver
,
LCE_StatServiceNotifier
_disp_model :
LCE_Disperse_base
_disp_propagule_prob :
LCE_Disperse_base
_dispersing_sex :
LCE_Breed_Disperse
_DispMatrix :
LCE_Disperse_base
_dist_p1 :
TProtoDeletMutations_bitstring
_dist_p2 :
TProtoDeletMutations_bitstring
_do_change_local_opt :
LCE_Selection_base
_do_fill :
LCE_Resize
_do_flush :
LCE_Resize
_do_inherit :
LCE_Breed_base
_do_postexec :
SimRunner
_do_postexec_replicatewise :
SimRunner
_do_regulate :
LCE_Resize
_doAmongPop :
LCE_Cross
_doByAlleleFreq :
LCE_QuantiInit
_doByTraitValue :
LCE_QuantiInit
_doInitMutation :
TProtoQuanti
_dominance :
TProtoDeletMutations_bitstring
_dominance_effects :
TProtoQuanti
_dominance_is_constant :
TProtoQuanti
_dominance_model :
TProtoDeletMutations_bitstring
,
TProtoQuanti
_dominance_sd :
TProtoQuanti
_doReplace :
LCE_Cross
_doRun :
SimRunner
_doWithinPop :
LCE_Cross
_effects :
TProtoDeletMutations_bitstring
_effects_bivar :
TProtoQuanti
_effects_multivar :
TProtoQuanti
_eigval :
TTQuantiSH
_eigvect :
TTQuantiSH
_endTime :
SimRunner
_eval :
TProtoQuanti
,
TTQuantiSH
_eVar :
TTQuantiSH
_eVariance :
LCE_Selection_base
,
TProtoQuanti
_evec :
TTQuantiSH
_evect :
TProtoQuanti
_event_name :
LifeCycleEvent
_ExecRank :
FileHandler
_extension :
FileHandler
_externalFile :
Param
_extinction_threshold :
LCE_Patch_Extinction
_extrate :
TTWolbachiaSH
_father :
Individual
_fatherID :
Individual
_fdesc :
BinaryDataSaver
_fdisp_trait_link :
LCE_Disperse_EvolDisp
_fdispIdx :
TTDispersalSH
_fec_cost :
LCE_Breed_Wolbachia
_fecundity :
Individual
_fem_cost :
LCE_Disperse_EvolDisp
_fem_rate :
LCE_Disperse_base
_FHLinkedEvent :
EventFileHandler< LCE >
_FHLinkedTrait :
TraitFileHandler< TP >
_FHLinkedTraitIndex :
TraitFileHandler< TP >
_fileHandler :
LCE_StatServiceNotifier
_filename :
BinaryDataLoader
_FileServices :
SimRunner
_fis :
TTNeutralGenesSH
_fis_WC :
TTNeutralGenesSH
_fis_WC_loc :
TTNeutralGenesSH
_fit :
TTNeutralGenesSH
_fit_WC :
TTNeutralGenesSH
_fit_WC_loc :
TTNeutralGenesSH
_fitness :
LCE_Selection_base
_fitness_model :
TProtoDeletMutations_bitstring
_fitness_scaling_factor :
TProtoDeletMutations_bitstring
_FitnessFixModel :
LCE_Selection_base
_fix_loc_global :
TTNeutralGenesSH
_fix_loc_local :
TTNeutralGenesSH
_fixed_disp_rate :
LCE_Disperse_EvolDisp
_fixloc :
TTDeletMutBitstrSH
_fixLocPerPatch :
TTDeletMutBitstrSH
_Fmean :
TTWolbachiaSH
_format :
FileMergerFH
_Fpedigree :
LCE_Selection_base
_freq :
TTBDMI_SH
,
TTDeletMutBitstrSH
_freqExtractor :
TProtoQuanti
_freqIcomp :
TTBDMI_SH
_Fst :
TTDeletMutBitstrSH
_fst :
TTNeutralGenesSH
_fst_matrix :
TTNeutralGenesSH
_fst_W1 :
TTNeutralGenesSH
_fst_W2 :
TTNeutralGenesSH
_fst_WC :
TTNeutralGenesSH
_fst_WC_loc :
TTNeutralGenesSH
_fst_WH :
TTNeutralGenesSH
_G :
TTQuantiSH
_gen :
BinaryDataLoader
_gender :
TProtoDispersal
,
TTDispersal
_generation :
BinaryDataSaver
_generation_in_file :
BinaryDataLoader
_GenerationOccurrence :
FileHandler
_generations :
FileHandler
,
LCE_Resize
,
Metapop
,
SimRunner
_genITER :
FileHandler
,
LCE_Resize
_genomic_mut_rate :
TProtoBDMI
,
TT_BDMI
,
TTDeletMutations_bitstring
_genomic_mutation_rate :
TProtoQuanti
_genoTable :
TProtoBDMI
,
TTQuantiSH
_get_numFemOffspring :
LCE_Breed_Disperse
_get_numMalOffspring :
LCE_Breed_Disperse
_get_patchFecundity :
LCE_Breed_Disperse
_get_VA_func_ptr :
LCE_Breed_Quanti
,
LCE_QuantiModifier
_getFitness :
LCE_Selection_base
_getGenotypeWithDominance :
TProtoQuanti
_getMutationValues :
TProtoQuanti
_getRawFitness :
LCE_Selection_base
_getStat :
StatRecorder< S >
_getStatOneArg :
StatRecorder< S >
_getStatTwoArg :
StatRecorder< S >
_globalAlleleFreq :
TTNeutralGenesSH
_groups :
DataTable< T >
_growthRates :
LCE_Breed_Disperse
_gsl_mutation_matrix :
TProtoQuanti
_gsl_selection_matrix :
LCE_Selection_base
_h2 :
LCE_Breed_Quanti
,
LCE_QuantiModifier
,
TProtoQuanti
_h2_isBroad :
TProtoQuanti
_h2_setTime :
TProtoQuanti
_haploGenotCoding :
TT_BDMI
_harvest_dist_shape :
LCE_Patch_Extinction
_harvest_dist_stdev :
LCE_Patch_Extinction
_harvest_distribution :
LCE_Patch_Extinction
_harvest_proportion :
LCE_Patch_Extinction
_harvest_size :
LCE_Patch_Extinction
_harvest_size_varies :
LCE_Patch_Extinction
_hasExternalFile :
Param
_hasMultipleArgs :
Param
_heteroTable :
TTNeutralGenesSH
_hmz :
TTDeletMutations_bitstring
_Hmz :
TTDeletMutBitstrSH
_Ho :
TTDeletMutBitstrSH
_ho :
TTNeutralGenesSH
_home :
Individual
_Hs :
TTDeletMutBitstrSH
_hs :
TTNeutralGenesSH
_hsnei :
TTNeutralGenesSH
_Ht :
TTDeletMutBitstrSH
_ht :
TTNeutralGenesSH
_htnei :
TTNeutralGenesSH
_htz :
TTDeletMutations_bitstring
_id :
Individual
_ID :
Patch
_in_pop :
BinaryDataLoader
_incomp_cost :
LCE_Breed_Wolbachia
_ind_cntr :
LCE_Selection_base
_index :
TraitPrototype
_infected_fec :
LCE_Breed_Wolbachia
_inherit_fun_ptr :
TProtoQuanti
_inherit_func_ptr :
TProtoBDMI
,
TProtoDeletMutations_bitstring
,
TProtoNeutralGenes
,
TT_BDMI
,
TTDeletMutations_bitstring
,
TTNeutralGenes
_init_dist :
TProtoDispersal
_init_dist_param :
TProtoDispersal
_init_freq :
LCE_Init_BDMI
,
LCE_NtrlInit
,
LCE_QuantiInit
,
TProtoBDMI
,
TProtoDeletMutations_bitstring
_init_model :
TProtoNeutralGenes
,
TTNeutralGenes
_init_random :
TProtoDispersal
_init_rate_fem :
TProtoDispersal
,
TTDispersal
_init_rate_mal :
TProtoDispersal
,
TTDispersal
_init_value :
TProtoQuanti
_init_values :
LCE_QuantiInit
_inoculum_size :
LCE_Breed_Wolbachia
_inoculum_time :
LCE_Breed_Wolbachia
_input_arg :
Param
_inputParams :
ParamManager
,
ParamsParser
_is_absolute :
LCE_Selection_base
_is_infected :
TTWolbachia
_is_local :
LCE_Selection_base
_is_permanent :
LCE_QuantiModifier
_isBounded :
Param
_isByNumber :
LCE_Disperse_base
_isContinuousEffect :
TTDeletMutBitstrSH
_isExtinct :
Patch
_isForward :
LCE_Disperse_base
_isGenerationPeriodic :
FileHandler
_isHaploid :
TProtoBDMI
,
TT_BDMI
_isInitSet :
TProtoBDMI
_isInputHandler :
FileHandler
_isMasterExec :
FileHandler
_isPeriodic :
BinaryDataSaver
_isRegistered :
TTProtoWithMap
_isReplicatePeriodic :
FileHandler
_isRequired :
Param
,
ParamSet
_isSet :
Param
,
ParamSet
_isTemporal :
Param
_junctions :
GeneticMap
_K :
Patch
_KFem :
Patch
_KMal :
Patch
_LCE_Templates :
ComponentManager
_LCELinkedTraitIndex :
LifeCycleEvent
_LCELinkedTraitType :
LifeCycleEvent
_len :
BinaryStorageBuffer
_length :
DataTable< T >
,
TMatrix
_letheq :
LCE_Selection_base
,
TTDeletMutBitstrSH
_LifeCycle :
SimBuilder
_loader :
Metapop
_local_optima :
LCE_Selection_base
_lociLookupTable :
GeneticMap
_lociMapPositions :
TTProtoWithMap
_locposition_map :
FileMergerFH
_locPositionsPerTrait :
GeneticMap
_locus_num :
TProtoNeutralGenes
,
TTNeutralGenes
_locusByteSize :
TProtoQuanti
_logfile :
SimRunner
_logWriter :
FileServices
_macroMap :
ParamsParser
_make_offspring :
LCE_Breed_Disperse
_mal_cost :
LCE_Disperse_EvolDisp
_mal_rate :
LCE_Disperse_base
_manager :
LCE_ParamUpdaterNotifier
_map :
TTProtoWithMap
_map_index :
FileMergerFH
_mapIndex :
TTProtoWithMap
_mapResolution :
TTProtoWithMap
_mating_males :
LCE_Breed_base
_mating_proportion :
LCE_Breed_base
_mating_system :
LCE_Breed_base
_matings :
Individual
_max_fitness :
LCE_Selection_base
_mdisp_trait_link :
LCE_Disperse_EvolDisp
_mdispIdx :
TTDispersalSH
_mean_alpha :
TTNeutralGenesSH
_mean_fecundity :
LCE_Breed_base
_mean_fitness :
LCE_Selection_base
_mean_theta :
TTNeutralGenesSH
_meanD :
TTNeutralGenesSH
_meanFemDisp :
TTDispersalSH
_meanG :
TTQuantiSH
_meanGenLength :
SimRunner
_meanMalDisp :
TTDispersalSH
_meanOffFemDisp :
TTDispersalSH
_meanOffMalDisp :
TTDispersalSH
_meanP :
TTQuantiSH
_meanReplElapsedTime :
SimRunner
_meanViab :
TTDeletMutBitstrSH
_mergeWriter :
LCE_FileServicesNotifier
_Mmean :
TTWolbachiaSH
_mode :
FileServices
,
SimRunner
_modeArg :
SimRunner
_model :
LCE_Breed_Wolbachia
_mother :
Individual
_motherID :
Individual
_mpimgr :
Metapop
_multiArgs :
Param
_multipleOccurences :
FileHandler
_mut_mean :
TProtoDispersal
,
TTDispersal
_mut_model :
TProtoNeutralGenes
,
TTNeutralGenes
_mut_rate :
TProtoBDMI
,
TProtoDeletMutations_bitstring
,
TProtoDispersal
,
TProtoNeutralGenes
,
TT_BDMI
,
TTDispersal
,
TTNeutralGenes
_mutate_func_ptr :
TProtoNeutralGenes
,
TTNeutralGenes
_mutation_correlation :
TProtoQuanti
_mutation_func_ptr :
TProtoBDMI
,
TProtoQuanti
,
TT_BDMI
,
TTDeletMutations_bitstring
_mutation_matrix :
TProtoQuanti
_mutation_model :
TProtoDeletMutations_bitstring
_mutation_sigma :
TProtoQuanti
_my_mpi_manager :
SimRunner
_myComponent :
ParamUpdater< SC >
_myDataSaver :
BinaryStorageBuffer
_myHandler :
StatRecorder< S >
_myOwner :
Param
,
ParamSet
_myPopModelFuncPtr :
LCE_Breed_Quanti
_myProto :
TT_BDMI
,
TTDeletMutations_bitstring
,
TTDispersal
,
TTNeutralGenes
,
TTQuanti
,
TTraitWithMap
_myUpdater :
Param
_myUpdaterFunction :
ParamUpdater< SC >
_name :
Param
,
ParamSet
,
StatRecBase
_nb_age_class :
Patch
_nb_all_global :
TTNeutralGenesSH
_nb_all_local :
TTNeutralGenesSH
_nb_hmz_mutations :
TTDeletMutations_bitstring
_nb_htz_mutations :
TTDeletMutations_bitstring
_nb_locus :
TProtoBDMI
,
TProtoDeletMutations_bitstring
,
TProtoQuanti
,
TT_BDMI
,
TTDeletMutations_bitstring
,
TTQuantiSH
_nb_mutations :
TTDeletMutations_bitstring
_nb_trait :
LCE_Breed_Selection
,
TTQuantiSH
_nb_traits :
TProtoQuanti
_nDam :
LCE_Cross
_new_sim :
BinaryDataLoader
_next_occurrence :
LCE_QuantiModifier
_nLoci :
LCE_NtrlInit
,
LCE_QuantiInit
_nLocus :
LCE_Init_BDMI
_nOffspring :
LCE_Cross
_nonSelectedTraitIndices :
LCE_Breed_Selection
_npatch :
LCE_Disperse_base
_nSire :
LCE_Cross
_ntrait :
FileMergerFH
_nTrait :
GeneticMap
_nTraits :
LCE_QuantiInit
_num_buckets :
BinaryStorageBuffer
_num_colonizers :
LCE_Breed_Disperse
_numChromosome :
GeneticMap
,
TTProtoWithMap
_numChrsmPerTrait :
GeneticMap
_numLoci :
TTProtoWithMap
_numLociPerChrmsm :
TTProtoWithMap
_numLociPerChrsmPerTrait :
GeneticMap
_numLociPerTrait :
GeneticMap
_numRecorders :
StatServices
_occurrence :
LCE_StatServiceNotifier
,
StatServices
_occurrences :
BinaryDataSaver
,
LCE_QuantiModifier
,
StatServices
_offsetDataStart :
BinaryDataLoader
,
BinaryDataSaver
_output_option :
TTNeutralGenesFH
,
TTQuantiFH
_paramPrefix :
TTProtoWithMap
_params :
FileServices
,
ParamSet
,
ParamUpdaterBase
_paramSet :
ParamManager
,
SimComponent
_paramUpdater :
UpdaterServices
_ParamUpdaterManager :
SimRunner
_parsedParams :
ParamsParser
_patch2keep :
LCE_Resize
_patch_sample_age :
FileServices
_patch_sample_size :
FileServices
,
MPFileHandler
_patchBackup :
LCE_Resize
_patchFreq :
TTBDMI_SH
_patchIcmp :
TTBDMI_SH
_patchK :
Metapop
_patchKfem :
Metapop
_patchKmal :
Metapop
_patchNbr :
Metapop
,
TTQuantiSH
_patchSizes :
Metapop
_path :
FileHandler
_pcovar :
TTQuantiSH
_ped_prop :
MPStatHandler
_pedigree :
FHPedigreeReader
_pedigree_file :
LCE_Cross
_pedigree_pop :
LCE_Cross
_pedigreeClass :
Individual
_peigval :
TTQuantiSH
_peigvect :
TTQuantiSH
_perChrsmLength :
GeneticMap
_pExtractor :
BinaryDataLoader
_phe :
LCE_Selection_base
_phenoTable :
LCE_SelectionSH
,
TTQuantiSH
_phenotype :
TT_BDMI
,
TTDeletMutations_bitstring
,
TTDispersal
_phenotypes :
TProtoQuanti
,
TTQuanti
_ploidy :
TProtoNeutralGenes
,
TTNeutralGenes
_pmeanG :
TTQuantiSH
_pmeanP :
TTQuantiSH
_pop :
FileHandler
,
StatHandlerBase
_popPtr :
FileServices
,
LifeCycleEvent
,
StatServices
_postexec_args :
SimRunner
_postexec_script :
SimRunner
_precision :
StatServices
_prefix :
LCE_Disperse_base
_printAverages :
StatServices
_PropaguleTargets :
LCE_Disperse_base
_protoIndividual :
IndFactory
_protoTraits :
IndFactory
_pVa :
TTQuantiSH
_pVp :
TTQuantiSH
_QuantiProto :
LCE_Breed_Quanti
,
LCE_QuantiInit
,
LCE_QuantiModifier
_rand_size_fct :
LCE_Patch_Extinction
_random_seed :
SimRunner
_rate :
TTWolbachiaFH
_rate_of_change_is_std :
LCE_Selection_base
_rate_of_change_local_optima :
LCE_Selection_base
_reader :
LCE_Cross
,
TProtoDeletMutations_bitstring
,
TProtoQuanti
_readers :
FileServices
_realizedFecundity :
Individual
_recomb_rate :
TProtoBDMI
,
TProtoNeutralGenes
,
TT_BDMI
,
TTNeutralGenes
_recomb_template :
TT_BDMI
_recombinationRate :
GeneticMap
_recombLength :
GeneticMap
_recombRate :
TTProtoWithMap
_recombRatePerChrmsm :
TTProtoWithMap
_recorders :
StatHandler< SH >
_records :
TTQFreqExtractor
_recPositions :
GeneticMap
_reducedDispMat :
LCE_Disperse_base
_reducedDispMatProba :
LCE_Disperse_base
_rep_filename :
FileServices
_ReplicateOccurrence :
FileHandler
_replicates :
Metapop
,
SimRunner
_requiredAge :
Metapop
_res1 :
LCE_Selection_base
_resolution :
GeneticMap
_root_dir :
FileServices
_rows :
TMatrix
_rSites :
TT_BDMI
_sample_age :
LCE_FileServicesNotifier
_sample_pop :
FileServices
_sample_size :
LCE_FileServicesNotifier
_sampled_at_generation :
FileServices
_sampled_at_replicate :
FileServices
_scaling_factor :
LCE_Selection_base
_sd_fecundity :
LCE_Breed_base
_segrloc :
TTDeletMutBitstrSH
_segrLocPerPatch :
TTDeletMutBitstrSH
_selection_matrix :
LCE_Selection_base
_selection_variance :
LCE_Selection_base
_SelectionModels :
LCE_Selection_base
_selectTraitDimension :
LCE_Selection_base
_separator :
StatServices
_seq_length :
TProtoQuanti
_sequence :
TT_BDMI
,
TTDispersal
,
TTNeutralGenes
,
TTQuanti
_service :
FileHandler
,
LCE_FileServicesNotifier
,
LCE_StatServiceNotifier
,
StatHandlerBase
_set_effects_func :
TProtoDeletMutations_bitstring
_set_genotype_func_ptr :
TProtoQuanti
_set_std_rate_at_generation :
LCE_Selection_base
_set_trait_value_func_ptr :
TProtoQuanti
_setAge :
LCE_Resize
_setAtGeneration :
Param
_setNewLocalOptima :
LCE_Selection_base
_setScalingFactor :
LCE_Selection_base
_setStat :
StatRecorder< S >
_sex :
Individual
_SHLinkedEvent :
EventStatHandler< LCE, SH >
_SHLinkedTrait :
TraitStatHandler< TP, SH >
_SHLinkedTraitIndex :
TraitStatHandler< TP, SH >
_sib_coa :
TTNeutralGenesSH
_sib_prop :
MPStatHandler
,
TTNeutralGenesSH
_SibProps :
TTDeletMutBitstrSH
_simElapsedTime :
SimRunner
_simRecords :
ParamManager
_sites :
TT_BDMI
_size :
bitstring
_sizeofLocusType :
TProtoQuanti
_sizes :
DataTable< T >
,
Patch
_sname :
ParamsParser
_source :
Metapop
_source_filetype :
Metapop
_source_generation :
Metapop
_source_load :
Metapop
_source_load_periodicity :
Metapop
_source_name :
Metapop
_source_param_override :
Metapop
_source_preserve :
Metapop
_source_replicate_digits :
Metapop
_source_replicates :
Metapop
_source_required_age :
Metapop
_source_start_at_replicate :
Metapop
_startTime :
SimRunner
_statArg :
StatServices
_stater :
LCE_Selection_base
,
TProtoBDMI
_statHandler :
Metapop
_statHandlers :
StatServices
_statRecorders :
StatServices
_stats :
StatHandlerBase
,
TProtoDeletMutations_bitstring
,
TProtoDispersal
,
TProtoNeutralGenes
,
TProtoQuanti
,
TProtoWolbachia
_statService :
LCE_StatFH
_StatServices :
SimRunner
_statValues :
StatServices
_std_rate_reference_patch :
LCE_Selection_base
_strength :
TProtoDeletMutations_bitstring
_survival :
LCE_Selection_base
_table :
DataTable< T >
_table_set_age :
LCE_SelectionSH
,
TTNeutralGenesSH
,
TTQuantiSH
_table_set_gen :
LCE_SelectionSH
,
TTNeutralGenesSH
,
TTQuantiSH
_table_set_repl :
LCE_SelectionSH
,
TTNeutralGenesSH
,
TTQuantiSH
_tar_cmd :
BinaryDataSaver
_tar_ext :
BinaryDataSaver
_temporalArgs :
Param
_temporalParams :
ParamManager
_thePop :
SimRunner
_times :
TTWolbachiaFH
_title :
StatRecBase
_tot_bytes_in :
BinaryStorageBuffer
_totalLength :
GeneticMap
_totalNumLoci :
GeneticMap
_totRecombEventsMean :
GeneticMap
,
TTProtoWithMap
_trait :
TTDispersalSH
,
TTWolbachiaSH
_trait_nb :
Individual
_TraitIndices :
LCE_Selection_base
_traits :
FileMergerFH
,
GeneticMap
_Traits :
LCE_Selection_base
_TraitsIndex :
IndFactory
_transmit_rate :
TProtoWolbachia
,
TTWolbachia
_TTidx :
TTWolbachiaSH
_TTrait_Templates :
ComponentManager
_type :
Param
,
TProtoBDMI
,
TProtoNeutralGenes
,
TTDeletMutations_bitstring
,
TTNeutralGenes
_uncomp_cmd :
BinaryDataSaver
_updaters :
UpdaterServices
_Va :
TTQuantiSH
_val :
TMatrix
_var :
TTWolbachiaSH
_var_reprod_success :
MPStatHandler
_Vb :
TTQuantiSH
_Vg :
TTQuantiSH
_viability :
TTDeletMutBitstrSH
_viability_func_ptr :
TProtoBDMI
,
TProtoDeletMutations_bitstring
,
TT_BDMI
,
TTDeletMutations_bitstring
_Vp :
TTQuantiSH
_vPatch :
Metapop
_width :
StatServices
_word :
bitstring::reference
_words :
bitstring
_writer :
LCE_Breed_Wolbachia
,
LCE_Selection_base
,
Metapop
,
TProtoBDMI
,
TProtoDeletMutations_bitstring
,
TProtoQuanti
_writers :
FileServices
,
TProtoNeutralGenes
_ws :
TProtoQuanti
,
TTQuantiSH
_Xtion_rate :
LCE_Patch_Extinction
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